Question: how to Plot this figure with RNA-seq data using R?
0
gravatar for Liquan
2.9 years ago by
Liquan0
Liquan0 wrote:

Hi:

I have looked at a figure in one cell paper.

The link for the paper is http://www.sciencedirect.com/science/article/pii/S009286741631162X

I'd like to plot for Figure 3. A.

However I'm not familiar with R.

Can you give me some advice on this or some codes for me to use.

Thanks!

Liquan

R • 1.5k views
ADD COMMENTlink modified 2.9 years ago by Farbod3.3k • written 2.9 years ago by Liquan0
2

This is a volcano plot. Now you have a name for it you should be able to find plenty of code around, like this.

ADD REPLYlink written 2.9 years ago by christopher medway440
0
gravatar for Farbod
2.9 years ago by
Farbod3.3k
Toronto
Farbod3.3k wrote:

Dear Liquan, Hi

You can check this Tutorial and then review the "Similar posts" on the right side of the screen.

If you are using some RNA-seq data, you can use Trinity pipeline for volcano plot construction, too.

~ Best

ADD COMMENTlink modified 2.9 years ago • written 2.9 years ago by Farbod3.3k
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