Question: Functional annotation of unigenes
0
gravatar for Mehmet
19 months ago by
Mehmet410
Japan
Mehmet410 wrote:

Dear All:

I have a set of unigenes (~30.000). I want to use blastx for searching the unigenes against to non redundant, swissprot, and COG (cluster of ortho groups). Then, I want to use results in blast2go program for annotation. How can I search against to the databases?

Thank you.

blast sequence gene • 607 views
ADD COMMENTlink modified 19 months ago by apa@stowers370 • written 19 months ago by Mehmet410
1
gravatar for seta
19 months ago by
seta1000
Sweden
seta1000 wrote:

You can download the database of interest and NCBI-blast program and conduct locally blastx on the server.

ADD COMMENTlink written 19 months ago by seta1000
0
gravatar for apa@stowers
19 months ago by
apa@stowers370
Kansas City
apa@stowers370 wrote:

Web interface for NCBI blast

Web interface for NCBI CDD blast (for COGs)

Blast2Go download page

ADD COMMENTlink written 19 months ago by apa@stowers370
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