Question: Functional annotation of unigenes
0
gravatar for Mehmet
3.1 years ago by
Mehmet500
Japan
Mehmet500 wrote:

Dear All:

I have a set of unigenes (~30.000). I want to use blastx for searching the unigenes against to non redundant, swissprot, and COG (cluster of ortho groups). Then, I want to use results in blast2go program for annotation. How can I search against to the databases?

Thank you.

blast sequence gene • 1.0k views
ADD COMMENTlink modified 3.1 years ago by apa@stowers470 • written 3.1 years ago by Mehmet500
1
gravatar for seta
3.1 years ago by
seta1.2k
Sweden
seta1.2k wrote:

You can download the database of interest and NCBI-blast program and conduct locally blastx on the server.

ADD COMMENTlink written 3.1 years ago by seta1.2k
0
gravatar for apa@stowers
3.1 years ago by
apa@stowers470
Kansas City
apa@stowers470 wrote:

Web interface for NCBI blast

Web interface for NCBI CDD blast (for COGs)

Blast2Go download page

ADD COMMENTlink written 3.1 years ago by apa@stowers470
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