Question: Cycling detection in ATAC-seq data
1
gravatar for ccag
2.9 years ago by
ccag30
Boston, MA
ccag30 wrote:

Does anyone have a good workflow for detecting cycling peaks in ATAC/CHIP-seq data? I'm relatively new to the analysis of ATAC data, but it was suggested to me to use Metacycle and I was wondering others thoughts.

Thanks!

atac-seq metacycle cycling • 1.4k views
ADD COMMENTlink modified 2.9 years ago by Czh3190 • written 2.9 years ago by ccag30
1
gravatar for Czh3
2.9 years ago by
Czh3190
China
Czh3190 wrote:

You can read this paper (http://www.nature.com/nature/journal/v534/n7609/full/nature18606.html), the methods are talking about how to call peaks.

ADD COMMENTlink modified 2.5 years ago by h.mon29k • written 2.9 years ago by Czh3190

That link is broken....could we get the title please?

ADD REPLYlink written 2.8 years ago by YaGalbi1.4k
1

Remove the ) at the end of the link. Anyway, title is "The landscape of accessible chromatin in mammalian preimplantation embryos", Wu et al.

ADD REPLYlink written 2.6 years ago by ATpoint26k
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