Question: Cycling detection in ATAC-seq data
1
gravatar for ccag
20 months ago by
ccag30
Boston, MA
ccag30 wrote:

Does anyone have a good workflow for detecting cycling peaks in ATAC/CHIP-seq data? I'm relatively new to the analysis of ATAC data, but it was suggested to me to use Metacycle and I was wondering others thoughts.

Thanks!

atac-seq metacycle cycling • 929 views
ADD COMMENTlink modified 20 months ago by Czh3180 • written 20 months ago by ccag30
1
gravatar for Czh3
20 months ago by
Czh3180
China
Czh3180 wrote:

You can read this paper (http://www.nature.com/nature/journal/v534/n7609/full/nature18606.html), the methods are talking about how to call peaks.

ADD COMMENTlink modified 15 months ago by h.mon19k • written 20 months ago by Czh3180

That link is broken....could we get the title please?

ADD REPLYlink written 19 months ago by YaGalbi1.3k
1

Remove the ) at the end of the link. Anyway, title is "The landscape of accessible chromatin in mammalian preimplantation embryos", Wu et al.

ADD REPLYlink written 16 months ago by ATpoint7.6k
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