Entering edit mode
7.3 years ago
potroy2007
•
0
According to the manual, the script bismark2report uses a Bismark alignment report to generate a graphical HTML report page.
However, when I try to run it, the error "No such file or directory at /software/bismark/0.16.3/bin/bismark2report line 948" was returned. I checked line 948 in the script and it is "open (DOC,"$Bin/bismark_sitrep.tpl") or die $!;". Do anyone know what this means and how can this be fixed? I'm using bismark/0.16.3 on an institutional high computing cluster btw.
This is my first post on the forum so sorry if my question wasn't worded or fomatted optimally :).
Does the following file exist: