i have 40x paired end (2*100) reads (genome size is approximately 2G) and I wanna de novo assembled them using ABYSS. i ran ABYSS on 32G RAM computer and it worked for 5 days without any results and i killed running due to some problems. i used ABYSS v 2.0.0. in abyss manual page mentioned that abyss v2.0.0 could handle human genome (76x) on 34G RAM while it can not done my project. why?
ABYSS, could give me good scaffold using paired end reads or it need mate end reads to do that?