DOPE score analysis with Modeller9.17

Question

[andreakhan03]

I used Modeller9.17 ( advanced modeling with multiple templates) to model the 3D structure of my protein. Modeller9.17 generated 5 models for my protein. From that, how do I select the best model? In my knowledge, the model with the lowest DOPE score will be the best model. How do I calculate the DOPE score with Modeller9.17 or Is there any other way to select the best model?

Answer 1

[db42]

You can assess your models using MODELLER assessment script https://salilab.org/modeller/9v6/manual/node242.html