Just a little background so that I can put my question into context. I have a list of SNPs and I want to find out which gene/CDS feature these SNPs occur in. For each reference bacterial genome I have gff and gbk files containing my sequence + annotations. Currently, I am using my gff files in Artemis and manually using the navigator to 'goto' my base of interest and manually recording the feature ID (more specifically the product and gene name that this base falls within). With over 200 SNPs to look at per bacterial genome this is understandably taking its time.
Therefore, my question is; is there an easier or more efficient way to do this?
Any advice on this would be very much appreciated and I would like to give my thanks to anyone who might be able to help in advance.