How to get gene full description with Ensembl IDs?
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5.8 years ago
Tao ▴ 490

Hi,

I have a list of genes with ensembl ID from both gencode_v14 and gencode_v19 GTF files. I want to get the full descriptions of them, here, the full description is like: "Leucine-rich repeat-containing protein 37A2" whose Ensembl ID is ENSG00000238083.3. It would be perfect to have downloaded plant files like .txt or .csv containing the annotation I want. Other methods are also welcome.

Thanks!

Best, Tao

gene annotation Ensembl • 2.1k views
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5.8 years ago

If I understood your question correctly you can get the answer through Ensembl Biomart.

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5.8 years ago
cdsouthan ★ 1.9k

A list of Ens IDs should also work in the UniProt ID mapper. It should give the same answers as BioMart but the column display settings would give you more flexible options. In addition you can further slice and dice your mapped set

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