Question: Ho to fix a VCFAnnotator software error
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gravatar for genome21
3.8 years ago by
genome2110
genome2110 wrote:

When running a VCFAnnotator software http://vcfannotator.sourceforge.net/ I`ve got:

Error, no gene feature found for gene4107.... ignoring feature. Error, no gene feature found for gene4108.... ignoring feature. Error, no gene feature found for gene4109.... ignoring feature. Error, no gene feature found for gene4110.... ignoring feature.

-reading vcf file: DecomposedPilonReducedresult.vcf


Reading VCF for contig: AL123456 [1000 vcf lines read for AL123456] Error, no sequence for contig: AL123456 at ./VCF_annotator.pl line 156. Done

How to repair that?

vcf • 593 views
ADD COMMENTlink written 3.8 years ago by genome2110

What have you tried?

ADD REPLYlink written 3.8 years ago by Michael Dondrup48k
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