Hi I'm trying to use NCBI::eUtils to obtain microarray / RNASeq datasets from GEO for use in a meta-analysis. I've based my searches on the examples at https://www.ncbi.nlm.nih.gov/geo/info/geo_paccess.html
I've a couple of simple questions: Say I start with this query (from the FAQ):
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esearch.fcgi? ... db=gds& ... term=GPL96[ACCN]+AND+gse[ETYP]+AND+cel[suppFile]& ... retmax=5000& ... usehistory=y
How do I filter to remove "SuperSeries" from the returned datasets?
How do I filter to keep only datasets with at least 4 samples and less than 200 samples?