Question: Biological Replicate Chip-exo
gravatar for Sudhir Jadhao
3.1 years ago by
Sudhir Jadhao70 wrote:

Hello everyone, I have biological replicate, I have called peaks separately and to get final peaks I have used IDR and common peak with at least on overlap. I am getting very less number of peaks ~2000 out of ~40000. I am thinking of merge bam file of replicate and call peak on merge file. Can anyone please suggest me, It will be good Idea?

Note: There are other tool available for replicate data but I want to used PeakXus which dont have option of providing replicate.

Thank you In advance

chip-seq • 786 views
ADD COMMENTlink modified 3.1 years ago • written 3.1 years ago by Sudhir Jadhao70
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