Running R for an individual; checking admixture
0
0
Entering edit mode
4.1 years ago
beneficii ▴ 60

First, I would like to thank everyone for the help in getting me this far. Admixture has now run successfully and produced the files genome.Q.4 and genome.F.P

I'm wanting to run R for an individual (me), but it seems really opaque how I'd do that. I'm wanting to look at things like gene clusters based on the data produced by Admixture.

I've looked online, the closest was a Discovery blog post back in 2011, but the "master list" needed for R to run is no longer on the website linked, so I'd like to know where to start.

Thanks.

EDIT: On second thought, gene cluster wouldn't make much sense, so definitely just an admixture geographical origin result may be helpful.

R admixture plink individual • 976 views
ADD COMMENT

Login before adding your answer.

Traffic: 1791 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6