problem with NCBI remap in genomic coordinates of SNP which arenot mapped
0
0
Entering edit mode
4.8 years ago

Hi, I'm starting out new in bioinformatics. I'm trying to convert SNPs with genomic coordinates in ovis aries 3.1 assembly to oar_v4.0. I used map file (Oar_v 3.1) for making bed file and then remaped this file by NCBI Remap based on oar_ v4.0 The problem is that SNP on chr0 dosenot remaped by NCBI Remap dose any body know how can I get genomic coordinates of SNP in Oar_ v4.0 which are mapped on chromosome 0 in first assembly?

thanks a lot for any idea

SNP remap cnbi • 1.2k views
ADD COMMENT

Login before adding your answer.

Traffic: 1594 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6