Any tools to detect lncRNAs from RNA-seq data?
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7.4 years ago

Hi,

I have a set of RNA-seq data, extracted from different conditions plus the genome, the transcriptome and the genome annotation. I would like to detect lncRNA from RNA-seq data. Any tool available for this?

RNA-Seq • 1.9k views
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If you already have annotations for lncRNA then just calculate its expression by using RSEM

If not then you'd have to run Cufflinks as RABT assembly

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