Entering edit mode
6.1 years ago
arash.iranzadeh1980 ▴ 30
I have a set of RNA-seq data, extracted from different conditions plus the genome, the transcriptome and the genome annotation. I would like to detect lncRNA from RNA-seq data. Any tool available for this?
If you already have annotations for lncRNA then just calculate its expression by using RSEM
If not then you'd have to run Cufflinks as RABT assembly