Question: Problems installing ete3 using conda
1
gravatar for jyu429
2.1 years ago by
jyu429120
United States
jyu429120 wrote:

Hi,

I'm having some trouble installing ete3 using the recommended conda way. I first ran conda install -y pip six numpy pyqt lxml gcc to install all the dependencies, but then when I ran conda install -c etetoolkit ete3 ete3_external_apps I was met with this error:

UnsatisfiableError: The following specifications were found to be in conflict:
  - ete3_external_apps -> python 2.7* -> openssl 1.0.1*
  - python 3.6*
Use "conda info <package>" to see the dependencies for each package.

Is this implying that my python 2.7 is conflicting with the current python 3 version?

conda ete3 • 1.8k views
ADD COMMENTlink modified 2.0 years ago by Madhuran Thiagarajah0 • written 2.1 years ago by jyu429120
1

I had a similar error from installing a different package. I solved it by removing everything that are in conflict (including python itself), and then installing what I need (in your case, ete3). This way, conda should also install python again because it's one of the dependencies.

I hope this helps,

ADD REPLYlink written 2.1 years ago by shunyip180

Are you trying to do this inside a virtualenv?

ADD REPLYlink written 2.1 years ago by jrj.healey11k

No, I don't think so.

ADD REPLYlink written 2.1 years ago by jyu429120

You could try it as such? Using virtualenvs often solved package conflicts etc.

ADD REPLYlink written 2.1 years ago by jrj.healey11k
0
gravatar for Madhuran Thiagarajah
2.0 years ago by
Toronto Ontario
Madhuran Thiagarajah0 wrote:

I had a similar problem when trying to install some other packages. I found this thread where one user suggested running:

conda install python=3.5

my problem was resolved after:

conda install python=2.7

then running the command for my package installation.

ADD COMMENTlink written 2.0 years ago by Madhuran Thiagarajah0
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