Hello everyone!
I am trying to install MUMmer 3.9.4 on Ubuntu, following the instructions given here: https://github.com/gmarcais/mummer/blob/master/INSTALL.md
When I try to run nucmer, I get this error message:
nucmer: error while loading shared libraries: libumdmummer.so.0: cannot open shared object file: No such file or directory
I have tried to look it up online, but can't seem to find anything.
Any help would be greatly appreciated!
Nancy
Why don't you just install the package?
sudo apt-get install mummer
Because that version of MUMmer has a query size limit, and my genome files are twice the size of that. I have tried the make CPPFLAGS="-O3 -DSIXTYFOURBITS" get-around, but it doesn't work.
The 3.9.4 version says that it increased the size limit to 120TB, so I wanted to see if this works.