Compiling HomoloGene Pairwise Alignment Scores Identity% - API or Database download?
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7.1 years ago

I'm trying to compile HomoloGene Pairwise Alignment Scores from human homologene IDs to all other organisms. An example of what I'm trying to download for one gene is here.

I've searched through the HomoloGene FTP site, as well as other related NCBI databases looking for where this particular information is stored or whether it is calculated when each gene is accessed.

Creating a script to scrape the website for 10k+ HomoloGene IDs would be against the TOS of the site, so does anyone know how these scores are calculated and whether they are compiled in another FTP site, or where I would begin writing a script to access this information through their API?

homologene pairwise alignment scores • 1.3k views
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