ENCODE DNAse 1 HyperSensitivity Data - Signal of unique reads vs Base Overlap Signal vs Raw Signal
0
0
Entering edit mode
7.4 years ago
morovatunc ▴ 550

Hi,

I would like to know the difference between base overlap signal, raw signal, signal of unique peaks output types which belong to Encode DNAse 1 bigwigs.

I see that signal of unique reads bigwig file is greater than raw signal file. which confuses me. Shouldn't raw data be larger than a curated data?

Also for the comparison between base overlap signal vs signal of unique reads, if you have some further information could you tell me the difference.

My aim is to get open chromatin regions on the genome. So any comment would be useful for me.

Thanks in advance,

Tunc.

ENCODE • 1.6k views
ADD COMMENT

Login before adding your answer.

Traffic: 1864 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6