Question: IDBA-UD Parameters for Bio Linux?
gravatar for Seot
3.5 years ago by
Seot0 wrote:

Hi all,

Does anyone know where to find a list, or recent tutorial, that has IDBA-UD assembly parameters? I'm using Bio Linux, if that helps. I don't know if the parameters and commands for IDBA-UD assembly differs between workstations. I did find the PDF "Metagenomics Workshop Documentation: Release 1" but it seems a bit vague for a beginner... (for example, what do "-l mtc=1" and "-b y" mean?). Any help will be appreciated.

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