Question: Dataset containing all HLA class I alleles
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gravatar for darkmatter1996
11 months ago by
darkmatter19960 wrote:

I am running an experiment in which I need to sample all six HLA class I alleles (HLA-A, HLA-B, HLA-C) repeatedly. Is there a dataset online that contains this information? I found this website (http://www.allelefrequencies.net/) but I cannot figure out how to get the data from it in the format that I want. Any help is appreciated. Thank you.

EDIT: Sorry, I think the question was a little unclear. What I want to do is have a dataset containing a set of patients, and all 6 of their HLA alleles. Is there such a dataset available somewhere?

hla • 313 views
ADD COMMENTlink modified 10 months ago by Biostar ♦♦ 20 • written 11 months ago by darkmatter19960

Have you looked at the IMGT/HLA database?

ADD REPLYlink written 11 months ago by genomax42k

I have not. How would I get this kind of data from there? Could you please explain a bit more.

ADD REPLYlink written 11 months ago by darkmatter19960

I thought you wanted to get reference sequences for the HLA alleles but you have clarified your question.

ADD REPLYlink modified 11 months ago • written 11 months ago by genomax42k
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