Question: Gene/peptide copy number
0
gravatar for nancydong20
2.0 years ago by
nancydong2080
nancydong2080 wrote:

Hello everyone!

I have a list of ~22,500 predicted peptides from a newly sequenced non-model organism genome. I ran it against the Swissprot database using blastp, and found that multiple predicted peptides were matched up to the same human GTPase protein (all with ~55% similarity). I aligned all of the sequences and found that they are pretty similar, plus all have the conserved GTPase P-loop domain.

Is this an indicator of "peptide copy number" or "gene copy number"?

Thank you very much!

genome • 556 views
ADD COMMENTlink written 2.0 years ago by nancydong2080
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1869 users visited in the last hour