Question: PantherDB Molecular function to graph
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gravatar for Jack
3.9 years ago by
Jack120
Jack120 wrote:

Is there a script (in either R or Python) available which will take a Molecular function from PantherDB and write it as a graph, as presented in the PantherDB website?

example:

and on the downloaded text file it's like:

protein binding#GO:0005515;receptor binding#GO:0005102;binding#GO:0005488

Molecular function for HGNC:10840 (link here)

binding
    -> protein binding
            -> receptor binding

Is there a script I can download which could read the columns of the file and print out the generated trees, exactly like the website?

python pantherdb R • 1.2k views
ADD COMMENTlink written 3.9 years ago by Jack120
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