Entering edit mode
7.1 years ago
biorepine
★
1.5k
Dear Biostars,
I generally use MACS program to identify broad peaks directly from a BAM file (without worrying about converting BAM into something else). However, it is still time consuming when I run it on a file with many sequencing reads (in my case 600 million reads). Is there any faster approach to do this ?
thanks in advance.