Entering edit mode
7.1 years ago
JimiOli
•
0
I want to transform my FPKM table (RNA-seq data) into a matrix, so that I can analyze the gene expression data in R, I was wondering which tool to use and how? And how to import this matrix output by DEseq or EdgeR?
Thank you!
Maybe you can start with this http://www.bioconductor.org/help/workflows/rnaseqGene/#starting-from-count-matrices :)
The manuals of edgeR and DESeq2 discuss how to import RNA-seq data for usage by the tool.