Question: Are COG IDs consistent across different versions of the eggNOG database?
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gravatar for jjoh090
2.5 years ago by
jjoh0900
jjoh0900 wrote:

Is it safe to assume that a sequence assigned to a particular COG ID in an old version of eggNOG is related to sequences assigned to that same COG ID in the latest version?

In more detail, I would like to fund the ‘COG functional category’ for some eggNOG COG IDs retrieved from UniProtKB (e.g. www.uniprot.org/uniprot/F0YY04.txt) However, I don’t know the version of eggNOG that these COG IDs were created under. I am wondering if I can safely use the COG-functional mapping provided in the latest version of eggNOG (v4.5) to infer the function of my UniProt sequences.

I am aware that I could query the UniProt sequences against the latest version of eggNOG, but this would be much more time consuming than using the available mappings supplied by UniProtKB.

Many thanks

embl eggnog • 997 views
ADD COMMENTlink modified 2.3 years ago by Biostar ♦♦ 20 • written 2.5 years ago by jjoh0900
1

see this: A: What are those "ENOG" numbers in eggNOG 4.5?

ADD REPLYlink written 2.5 years ago by jhc2.8k
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