Question: GiaB SV Calls for NIST:HG001/NA12878: What's the reference build?
2
gravatar for QVINTVS_FABIVS_MAXIMVS
24 months ago by
USA SoCal
QVINTVS_FABIVS_MAXIMVS2.2k wrote:

You would think NIST/GiaB would explicitly state the reference build for their putative gold standard SV calls. But I can't see it anywhere

I'm assuming it's in GRCh37???

ftp://ftp-trace.ncbi.nlm.nih.gov/giab/ftp/technical/svclassify_Manuscript/Supplementary_Information/Personalis_1000_Genomes_deduplicated_deletions.bed

Anyone else knows? I can't find any information in READMEs or in the published svclassify paper.

deletion cnv nist giab • 939 views
ADD COMMENTlink written 24 months ago by QVINTVS_FABIVS_MAXIMVS2.2k
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