Stacks: Map types in genotypes program
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7.1 years ago
anu014 ▴ 190

Greetings of the day Biostars!

Can anyone tell me what are different types of crosses we can give in 'genotypes program' ? According to manual it can be included by giving '-t' option. 'CP', 'DH', 'F2', 'BC1' and 'GEN' are the currently supported map types. What do these abbreviation means?

Tool's official website: http://catchenlab.life.illinois.edu/stacks/

Thanks in advance! :)

next-gen genome genotyping SNP software error • 1.1k views
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