Question: NGS CNV tools for windows users
0
gravatar for Bioinfo
20 months ago by
Bioinfo0
Bioinfo0 wrote:

Hi Since I am a beginer in the field of bioinformatic, i do not know the best tool for CNV detection extracted from NGS data. Can someone tell me which is the most relevant tool for CNV analysis that can be used for Windows users and is free of charge?

ADD COMMENTlink modified 20 months ago by Dhana70 • written 20 months ago by Bioinfo0

Can someone tell me which is the most relevant tool for CNV analysis that can be used for Windows users and is free of charge?

I don't think there is a tool which satisfies your three requirements.

ADD REPLYlink written 20 months ago by WouterDeCoster35k
1
gravatar for Dhana
20 months ago by
Dhana70
Helsinki, Finland
Dhana70 wrote:

If you are really interested in bioinformatics then you MUST start using UNIX based OS, most tools nowadays are developed to be run in command line (as it can be integrated into a pipeline easily). Few options for windows OS would be:

  1. Install virtual machine and then download Biolinux and use it with virtual box.
  2. Use Galaxy web platform.

There are other paid options like CLC Genomics workbench. But as I mentioned earlier, the options for windows based users are very limited.

ADD COMMENTlink written 20 months ago by Dhana70
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 2211 users visited in the last hour