Question: Differential Expression of illumina microarray data
0
gravatar for bio94
2.9 years ago by
bio9440
bio9440 wrote:

How to perform differential expression this Illumina Microarray GEO Dataset-GSE48624??? I'm want to perform differential expression analysis and get the list of up-regulated and down-regulated genes! Thank you

ADD COMMENTlink modified 21 months ago by Biostar ♦♦ 20 • written 2.9 years ago by bio9440
4

The Limma User Guide is an excellent read.

ADD REPLYlink written 2.9 years ago by h.mon29k
2

Another good starting point is the bioconductor workflow for microarray.

ADD REPLYlink written 2.9 years ago by WouterDeCoster42k
1

lumi?

ADD REPLYlink written 21 months ago by cpad011212k
1
gravatar for said3427
2.2 years ago by
said342790
Mexico
said342790 wrote:

You can use GEO2R and get the results in a minute.

https://www.ncbi.nlm.nih.gov/geo/geo2r/?acc=GSE48624

ADD COMMENTlink written 2.2 years ago by said342790
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1070 users visited in the last hour