Question: Differential Expression of illumina microarray data
0
gravatar for paul.elliot1994
13 months ago by
paul.elliot19940 wrote:

How to perform differential expression this Illumina Microarray GEO Dataset-GSE48624??? I'm want to perform differential expression analysis and get the list of up-regulated and down-regulated genes! Thank you

ADD COMMENTlink modified 5 months ago by said342760 • written 13 months ago by paul.elliot19940
3

The Limma User Guide is an excellent read.

ADD REPLYlink written 13 months ago by h.mon13k
1

Another good starting point is the bioconductor workflow for microarray.

ADD REPLYlink written 13 months ago by WouterDeCoster27k
0
gravatar for said3427
5 months ago by
said342760
Mexico
said342760 wrote:

You can use GEO2R and get the results in a minute.

https://www.ncbi.nlm.nih.gov/geo/geo2r/?acc=GSE48624

ADD COMMENTlink written 5 months ago by said342760
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