Question: Differential Expression of illumina microarray data
0
gravatar for paul.elliot1994
10 months ago by
paul.elliot19940 wrote:

How to perform differential expression this Illumina Microarray GEO Dataset-GSE48624??? I'm want to perform differential expression analysis and get the list of up-regulated and down-regulated genes! Thank you

ADD COMMENTlink modified 8 weeks ago by said342710 • written 10 months ago by paul.elliot19940
3

The Limma User Guide is an excellent read.

ADD REPLYlink written 10 months ago by h.mon10k
1

Another good starting point is the bioconductor workflow for microarray.

ADD REPLYlink written 10 months ago by WouterDeCoster25k
0
gravatar for said3427
8 weeks ago by
said342710
Mexico
said342710 wrote:

You can use GEO2R and get the results in a minute.

https://www.ncbi.nlm.nih.gov/geo/geo2r/?acc=GSE48624

ADD COMMENTlink written 8 weeks ago by said342710
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