Question: Putting new IDs on imputed data
0
gravatar for james.1.pickles
18 months ago by
james.1.pickles0 wrote:

I have imputed data contain in one .sample file and 23 .impute files.

Does the row order of the .sample file matter?

For example, if I change the ID numbers in columns 1 and 2, and then sort the file according to the new IDs, will this cause problems?

genome • 376 views
ADD COMMENTlink modified 17 months ago • written 18 months ago by james.1.pickles0

It would help if you showed examples of you files.

ADD REPLYlink written 18 months ago by st.ph.n2.3k
0
gravatar for james.1.pickles
17 months ago by
james.1.pickles0 wrote:

I solved my own problem, using the description of the file formats here.

Yes, the row order does matter, because:

"The order of individuals in the genotype file should match the order of the individuals in the sample file"

ADD COMMENTlink written 17 months ago by james.1.pickles0
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