I have a huge problem to run Canu assembler in the server. I made a script and run it. But, it never worked.
My command lines are like this;
canu useGrid=0 canu -p test -d ~/Genome_Assembly genomeSize=500000 -pacbio-raw ~/Genome_Assembly/test89.fastq
I have tried several time such as I add the path of the input file or options of '-p' or '-d'. Please give me any advice. Thanks.