To know the breast cancer subtypes and molecular types from TCGA data
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7.1 years ago
Ashmita ▴ 10

Hello,

I'm using the TCGA data related to Breast invasive carcinoma (BRCA).

I downloaded the clinical data that contains the clinical feature of each patient from TCGA.

My problem is that I can't find the subtypes of breast cancer and their molecular subtypes also. For example Luminal A, Luminal B, HER2+ve and Basal are the breast cancer subtypes and ER, PR, HER2 are their molecular subtypes.

Where can I find the subtypes information of BRCA for TCGA data? Does it exist at all? Please help me in this regard.

Thanks Ashmita

clinical gdc tcga firebrowse • 4.8k views
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Hi,

Were you able to find the subtype of the Breast Cancer from the data provided in the GDC portal?

Thanks, RP

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