To know the breast cancer subtypes and molecular types from TCGA data
0
1
Entering edit mode
4.5 years ago
Ashmita ▴ 10

Hello,

I'm using the TCGA data related to Breast invasive carcinoma (BRCA).

I downloaded the clinical data that contains the clinical feature of each patient from TCGA.

My problem is that I can't find the subtypes of breast cancer and their molecular subtypes also. For example Luminal A, Luminal B, HER2+ve and Basal are the breast cancer subtypes and ER, PR, HER2 are their molecular subtypes.

Where can I find the subtypes information of BRCA for TCGA data? Does it exist at all? Please help me in this regard.

Thanks Ashmita

clinical gdc tcga firebrowse • 4.1k views
ADD COMMENT
0
Entering edit mode
ADD REPLY
0
Entering edit mode

Hi,

Were you able to find the subtype of the Breast Cancer from the data provided in the GDC portal?

Thanks, RP

ADD REPLY

Login before adding your answer.

Traffic: 2438 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6