Annotate Protein List with COG / E.coli COG table
0
0
Entering edit mode
7.0 years ago
Benni ▴ 30

I have a protein list of escherichia coli. I want to annotate this list with the COG terms. Is there an online tool for that or is there a way to get a annotated gene/protein list for e.coli? I don´t want to run a sequence blast, since there should be already a database for e.coli proteins?

COG • 3.3k views
ADD COMMENT
0
Entering edit mode
ADD REPLY
0
Entering edit mode

EcoCyc doesn´t support COG annotation. How do I get the table in .csv and not .html?

ADD REPLY
0
Entering edit mode

Copy paste the contents from the E coli COG page (I assume that is the one you are interested in) into a new file?

ADD REPLY

Login before adding your answer.

Traffic: 1628 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6