Question: htseq-count works for some but not all samples
gravatar for rebeccakurtz62
3.7 years ago by
rebeccakurtz620 wrote:

I'm trying to create my count matrices and I am getting very strange results for two of my samples. They have almost no reads, while the rest look as expected. I'm extremely new to this, and would appreciate some trouble shooting advice. The last observation below is the big concern.

My job output file usually says [bam_sort_core] merging from 14 files...

But for the files that are of concern, it is completely blank.

graph of data

sequencing rna-seq gene • 712 views
ADD COMMENTlink modified 3.7 years ago • written 3.7 years ago by rebeccakurtz620
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