Question: How to determine if a sequence is nonsatellite sequence?
0
gravatar for bbb
23 months ago by
bbb60
Russian Federation
bbb60 wrote:

How to determine if a sequence is nonsatellite sequence? For example, I want to determine insertion of nonsatellite sequences in reads

dna sequence satellite • 491 views
ADD COMMENTlink modified 23 months ago by Biostar ♦♦ 20 • written 23 months ago by bbb60
1

To find out, scan your sequence with RepeatMasker Web Server.

ADD REPLYlink written 23 months ago by a.zielezinski8.6k

Simplest solution: Align things against a bunch of satellite sequence. If they don't align, then you have non-satellite sequence.

ADD REPLYlink written 23 months ago by Devon Ryan88k
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