Hi, I have 33 ligands in total, which were analyzed through SAM. Reported in an article entitled "Analysis of the major patterns of B cell gene expression changes in response to short-term stimulation with 33 single ligands". I selected 10 ligands from above data and wants additional analysis but they didn't provide the RAW data/CEL, I downloaded the Processed data from "ArrayExpress". I reviewed the limma tutorial and want to make sure the downloaded data file for limma. I need a starting point for analysis through limma, I attached one of processed data file as an example, Can I use processed data files as an input for limma and which type of analysis will be performed? I will be waiting for your valuable answers. Thank you,
Question: How to analyze processed data from ArrayExpress?
3.7 years ago by
Muhammad Haseeb • 40
Ajou University, Suwon, South Korea
Muhammad Haseeb • 40 wrote:
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