Question: (Closed) convert between vcf types
gravatar for samuel.lipworth
2.4 years ago by
University of Oxford
samuel.lipworth30 wrote:

I currently a vcf file which describes in one file the variant call for all samples at all variable positions eg:

sample1, sample2, sample3, sample4, sample5
1  A  A  T  A  T
5  T  T  G  T  G

I want to convert to the vcf type which shows the call for a variable positions for one sample only eg:

1 A
5 T

I'm sure I used to know a programme which could do this - any ideas?

vcf • 600 views
ADD COMMENTlink modified 2.4 years ago by Pierre Lindenbaum122k • written 2.4 years ago by samuel.lipworth30

Hello samuel.lipworth!

Questions similar to yours can already be found at:

We have closed your question to allow us to keep similar content in the same thread.

If you disagree with this please tell us why in a reply below. We'll be happy to talk about it.


ADD REPLYlink written 2.4 years ago by Pierre Lindenbaum122k
Please log in to add an answer.
The thread is closed. No new answers may be added.


Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 2252 users visited in the last hour