Question: (Closed) convert between vcf types
0
gravatar for samuel.lipworth
22 months ago by
University of Oxford
samuel.lipworth30 wrote:

I currently a vcf file which describes in one file the variant call for all samples at all variable positions eg:

sample1, sample2, sample3, sample4, sample5
1  A  A  T  A  T
5  T  T  G  T  G

I want to convert to the vcf type which shows the call for a variable positions for one sample only eg:

sample1
1 A
5 T

I'm sure I used to know a programme which could do this - any ideas?

vcf • 520 views
ADD COMMENTlink modified 22 months ago by Pierre Lindenbaum117k • written 22 months ago by samuel.lipworth30

Hello samuel.lipworth!

Questions similar to yours can already be found at:

We have closed your question to allow us to keep similar content in the same thread.

If you disagree with this please tell us why in a reply below. We'll be happy to talk about it.

Cheers!

ADD REPLYlink written 22 months ago by Pierre Lindenbaum117k
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