Hello all, I'd like to modify my vcfs to contain several info only. There are "GT:AD:DP:FT:GQ:PL:PP" in format column, but I want to include "GT,DP,GQ" only.
I ran "--extract-FORMAT-info" of vcftools, but the result file is not vcf format. What I want to have finally, is vcf file with "GT,DP,GQ" fields only.
Does anyone know how to handle this? Thanks.