Question: tcgabioloink level 1 data
gravatar for ugandhar.ch1
22 months ago by
ugandhar.ch110 wrote:

Hi All,

i am using R and Bio conductor to analyze tcga-brca raw microarray data. i am using tcgabioloiks package for do this i am using GDC query, gdc download and GDC prepare to downolad data. i am successfully download data and placed it in working directory. but i am not getting expression set after gdc prepare command. i am not sure what step should i follow after gdc prepare for further analysis? my final aim is to get differential gene expression values. please help me

Thank you

regards ugandhar

snp R software error • 578 views
ADD COMMENTlink modified 22 months ago by Mike1.2k • written 22 months ago by ugandhar.ch110
gravatar for Mike
22 months ago by
Mike1.2k wrote:

Could you please post your initial code, so it would be easy for others to find out your error.

ADD COMMENTlink written 22 months ago by Mike1.2k
Please log in to add an answer.


Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 2308 users visited in the last hour