Question: tcgabioloink level 1 data
gravatar for ugandhar.ch1
8 months ago by
ugandhar.ch110 wrote:

Hi All,

i am using R and Bio conductor to analyze tcga-brca raw microarray data. i am using tcgabioloiks package for do this i am using GDC query, gdc download and GDC prepare to downolad data. i am successfully download data and placed it in working directory. but i am not getting expression set after gdc prepare command. i am not sure what step should i follow after gdc prepare for further analysis? my final aim is to get differential gene expression values. please help me

Thank you

regards ugandhar

snp R software error • 263 views
ADD COMMENTlink modified 8 months ago by Mike880 • written 8 months ago by ugandhar.ch110
gravatar for Mike
8 months ago by
Mike880 wrote:

Could you please post your initial code, so it would be easy for others to find out your error.

ADD COMMENTlink written 8 months ago by Mike880
Please log in to add an answer.


Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 910 users visited in the last hour