How to validate the Gene connections?
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7.2 years ago
yancychy ▴ 10

Hello, I have built a connection networks of several genes. But I don not know how to validate the correlation between these genes? Is there any gene networks databases which can help me to validate my networks? Many thanks.

Best regards,

gene genome • 1.6k views
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7.2 years ago

I personally prefer to use http://www.genecards.org/ when I want to find some quick info about a gene. Networks presented there are from http://version10.string-db.org/ which is a work of SIB, EMBL and CPR consortium. These are people behind SwissProt, Upsala EDS and many other good things. For more in-depth analysis I prefer to rely on reading papers myself using PubMed to make sure info in a database is not just a typo by a rotating student.

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7.2 years ago
badribio ▴ 290

You should also look at BioGrid https://thebiogrid.org/

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7.2 years ago
yancychy ▴ 10

Thank you so much. Petr and badribio, I will try use the databases, Many thanks.

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