Question: The best Maximum Parsimony software
0
gravatar for l.souza
2.1 years ago by
l.souza70
Brasilia, Brazil
l.souza70 wrote:

What would you say is the best Maximum Parsimony method/software to use? I'm going to use to make a comparison between this and Maximun Likelihood (RAxML).

maximum tree phylogeny parsimony • 1000 views
ADD COMMENTlink modified 2.1 years ago by cfos4698130 • written 2.1 years ago by l.souza70
4
gravatar for cfos4698
2.1 years ago by
cfos4698130
cfos4698130 wrote:

I generally advise against parsimony, but I guess if it could be a useful form of comparison. Two software choices come to mind immediately: PAUP* (http://paup.sc.fsu.edu/downl.html) and TNT (http://www.zmuc.dk/public/phylogeny/tnt/). PAUP* used to require a license, but I'm not sure if this is still the case. TNT is free. Both are run through a command line interface.

ADD COMMENTlink written 2.1 years ago by cfos4698130
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