Standalone server for VCF files annotation with RefSeq, dbSNP, ExAC, ClinVar, 1000 genomes, HGNC, ESP6500, predicted consequences, SIFT, PolyPhen and more.
Supports modern browsers on computers, tablets, and smartphones.
Current GUI supports limited analysis functionality that now includes flexible filters and inheritance models with tumor/normal and trio analysis and two column sorting.
GUI supports history and versioning of your filters, models, analyses and views.
You can exports results into sql, txt and csv formats of selected variants.
It is free for academic use. Please read EULA here.
We provide scripts needed to start the server and add users on Linux systems here.
You can also use AGx as a cloud service provided by ALAPY. It is also free for education. Please register here to get access.
Please tell us what you think and how we can make it better.