Question: Big Data Translation
0
gravatar for l.souza
23 months ago by
l.souza70
Brasilia, Brazil
l.souza70 wrote:

What tool can I use to translate a big amount of sequences of DNA into Amino Acids?

ADD COMMENTlink modified 23 months ago by genomax65k • written 23 months ago by l.souza70
1

Do you need to simply translate DNA into amino acids, or do you need to predict coding regions in transcripts? TransDecoder does the second task.

ADD REPLYlink written 23 months ago by h.mon24k

Simply translate DNA into amino acids.

ADD REPLYlink written 23 months ago by l.souza70
3
gravatar for genomax
23 months ago by
genomax65k
United States
genomax65k wrote:

EMBOSS TransSeq or SixPack.

For a lot of data you would want to download EMBOSS for running it locally.

ADD COMMENTlink written 23 months ago by genomax65k

Don't you know any local software that runs in Windows?

ADD REPLYlink written 23 months ago by l.souza70
1

EMBOSS for windows, here:

ftp://emboss.open-bio.org/pub/EMBOSS/windows/mEMBOSS-6.5.0.0-setup.exe

ADD REPLYlink written 23 months ago by h.mon24k

that runs in Windows?

If that is an important requirement for you then you should mention that in your question.

In addition, if the answer was helpful you should upvote it, if the answer resolved your question you should mark it as accepted. Upvote|Bookmark|Accept

ADD REPLYlink modified 23 months ago • written 23 months ago by WouterDeCoster38k
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