Principle component analyses PCA
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4.5 years ago
saj98 ▴ 130

Hello everyone

I have RNA seq data and I would like to do PCA. Do know any useful tutorial which can help me.

Thanks Shaima

R RNA-Seq • 2.4k views
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4.5 years ago

I find this youtube explanation from StatQuest quite informative.

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Thanks for the link, I am looking for steps to plot my data

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I did, but I could not get similar figure. The plot comes blank or give me only legends.

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Then post your full code and we can troubleshoot. Please make your questions as specific as possible.

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4.5 years ago
theobroma22 ★ 1.2k

There are many ways to do this. The Biostars community has answered this question many a time. Here is one of them: A: PCA plot of RPKM data from RNA-Seq dataset

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Thank you so much, this answer was useful. Also I found learning you tube which is very useful. I am sharing them with you.

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