Question: Is the DGRP data phased?
3.2 years ago by
mufernando • 10
mufernando • 10 wrote:
My question is described in the title.
I thought it was phased, but according to VCFtools it isn't:
vcftools --vcf dgrp2.vcf --phased --out teste VCFtools - UNKNOWN (C) Adam Auton and Anthony Marcketta 2009 Parameters as interpreted: --vcf immune.vcf --out teste --phased After filtering, kept 205 out of 205 Individuals After filtering, kept 0 out of a possible 39929 Sites No data left for analysis! Run Time = 1.00 seconds
Am I doing something wrong or is DGRP unphased?
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