rna seq docker
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4.4 years ago

I came across today wiht docker and how useful it is, the eprson at presentation spoke only about specific hello world example. I was wondering if there is some tutorial that teaches how to buil and use a docker image for rna seq analysis for example image with fastqc,trimmomatic,hisat2, stringtie etc..

Thanks.

docker • 1.9k views
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See this example.

This thread is a bit older: Docker - one image to rule them all?

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Thank you will go over it.

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4.4 years ago

For most common tools there are already docker images, since every tool in bioconda has a docker image made for it automatically.

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4.1 years ago
ypriverol • 0

You can search for containers in bioinformatics in www.biocontainers.pro/registry or request for them in github.com/BioContainers

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