Question: file "_peaks.bed" on macs2
0
gravatar for Brice222
10 months ago by
Brice22230
Brice22230 wrote:

Hi

I did PeakCalling with Macs2. I need to file format "_peaks.bed". But in the new version, does not exist the file format "_peaks.bed" .

How can I get the file "_peaks.bed" from the output Macs2?????? What ideas you have???

Thanks

peakcall chip-seq macs2 • 377 views
ADD COMMENTlink modified 10 months ago by YaGalbi1.1k • written 10 months ago by Brice22230
0
gravatar for YaGalbi
10 months ago by
YaGalbi1.1k
Biocomputing, MRC Harwell Institute, Oxford, UK
YaGalbi1.1k wrote:

Depending on whether you are calling narrow or broad peaks, the file you are looking for is .narrowPeaks or .broadPeaks ... these are both bed files.

ADD COMMENTlink written 10 months ago by YaGalbi1.1k
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