search ChIP-Seq and RNA-Seq datasets in EBI ENA advanced search

Question

[ehsansepahi]

I want to find some ChIP-Seq and RNA-Seq read datasets in EBI ENA using its advanced search form and terms. The thing is that I only want to have datasets from those studies that have both ChIP-seq and RNA-Seq datasets, but terms that I tried return results that are not what I want. In brief my question is:

1- How to find studies that have BOTH ChIP-Seq and RNA-Seq datasets and not only one of them

2- How to find studies that have BOTH ChIP-Seq and RNA-Seq datasets and not any other type of datasets

Thank you ALL

[Kevin Blighe]

You should not restrict yourself to one online repository, as there are many whose data is open access.

I just did a quick search (via search engine) and found these:

• RNA-Seq and ChIP-Seq reveals SQSTM1/p62 as a key mediator of JunB suppression of NF-κB-dependent inflammation (data deposited here: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE63081 )
• Conserved epigenomic signatures between mouse and human elucidate immune basis of Alzheimer's disease
• Integrated computational approach to the analysis of RNA-seq data reveals new transcriptional regulators of psoriasis

Search via a search engine, which is a lot better than those internal search functions.