Question: esearch in reutils package: how to specify dataset?
0
gravatar for ezrabekele17
3.0 years ago by
ezrabekele170 wrote:

Hello!

I have a question about the reutils package.

There is a function called esearch() which allows you to search the GEO database. So, I entered the same query that I would use in GEO: "UIDs<-esearch( term = "METHYLATION PROFILING BY ARRAY[DATASET TYPE]"), but esearch() doesn't recognize "DATASET TYPE".

So my question is, how do I specify the dataset type to esearch()?

This is my code btw: UIDs<-esearch( term = "METHYLATION PROFILING BY ARRAY[DATASET TYPE]" )

Thank you

R • 827 views
ADD COMMENTlink modified 3.0 years ago • written 3.0 years ago by ezrabekele170

Cross-posted to https://stackoverflow.com/questions/44532441/esearch-in-reutils-package-how-to-specify-dataset/44533151 where I answered.

ADD REPLYlink written 3.0 years ago by Neilfws48k
1
gravatar for ezrabekele17
3.0 years ago by
ezrabekele170 wrote:

I figured out you have to set the database as "gds".

ADD COMMENTlink written 3.0 years ago by ezrabekele170
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