Question: Best ORF to choose
gravatar for somitmittal
2.1 years ago by
somitmittal0 wrote:

If a gene sequence gives us multiple ORF's of varying lengths then what should be the criteria for choosing the best ORF for calculating various values like CAI,CBI etc.

dna rna-seq codon orf • 1.2k views
ADD COMMENTlink written 2.1 years ago by somitmittal0

Presuming that the different ORFs are splice variants, it is usual to take the longest ORF. But I would recommend to take a look at this study here

ADD REPLYlink written 2.1 years ago by microfuge1.1k
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